edge_stats: count_by_predicates: biolink:capable_of: count: 68577 provided_by: unknown: count: 68577 source: unknown: count: 68577 biolink:has_chemical_role: count: 1040 provided_by: unknown: count: 1040 source: unknown: count: 1040 biolink:has_part: count: 102275 provided_by: unknown: count: 102275 source: unknown: count: 102275 biolink:has_phenotype: count: 19727 provided_by: unknown: count: 19727 source: unknown: count: 19727 biolink:interacts_with: count: 89 provided_by: unknown: count: 89 source: unknown: count: 89 biolink:location_of: count: 26755 provided_by: unknown: count: 26755 source: unknown: count: 26755 biolink:occurs_in: count: 8597 provided_by: unknown: count: 8597 source: unknown: count: 8597 biolink:related_to: count: 112202 provided_by: unknown: count: 112202 source: unknown: count: 112202 biolink:subclass_of: count: 1172549 provided_by: unknown: count: 1172549 source: unknown: count: 1172549 biolink:type: count: 45 provided_by: unknown: count: 45 source: unknown: count: 45 unknown: count: 0 count_by_spo: biolink:AnatomicalEntity-biolink:location_of-biolink:OrganismTaxon: count: 4 provided_by: unknown: count: 4 source: unknown: count: 4 biolink:AnatomicalEntity-biolink:related_to-biolink:AnatomicalEntity: count: 631 provided_by: unknown: count: 631 source: unknown: count: 631 biolink:AnatomicalEntity-biolink:related_to-biolink:EnvironmentalFeature: count: 8 provided_by: unknown: count: 8 source: unknown: count: 8 biolink:AnatomicalEntity-biolink:subclass_of-biolink:AnatomicalEntity: count: 839 provided_by: unknown: count: 839 source: unknown: count: 839 biolink:AnatomicalEntity-biolink:subclass_of-biolink:EnvironmentalFeature: count: 9 provided_by: unknown: count: 9 source: unknown: count: 9 biolink:AnatomicalEntity-biolink:subclass_of-biolink:NamedThing: count: 32 provided_by: unknown: count: 32 source: unknown: count: 32 biolink:AnatomicalEntity-biolink:subclass_of-biolink:OntologyClass: count: 2 provided_by: unknown: count: 2 source: unknown: count: 2 biolink:BiologicalProcess-biolink:related_to-biolink:BiologicalProcess: count: 13614 provided_by: unknown: count: 13614 source: unknown: count: 13614 biolink:BiologicalProcess-biolink:related_to-biolink:CellularComponent: count: 149 provided_by: unknown: count: 149 source: unknown: count: 149 biolink:BiologicalProcess-biolink:related_to-biolink:MolecularActivity: count: 942 provided_by: unknown: count: 942 source: unknown: count: 942 biolink:BiologicalProcess-biolink:related_to-biolink:OntologyClass: count: 60 provided_by: unknown: count: 60 source: unknown: count: 60 biolink:BiologicalProcess-biolink:subclass_of-biolink:BiologicalProcess: count: 49812 provided_by: unknown: count: 49812 source: unknown: count: 49812 biolink:BiologicalProcess-biolink:subclass_of-biolink:OntologyClass: count: 546 provided_by: unknown: count: 546 source: unknown: count: 546 biolink:CellularComponent-biolink:related_to-biolink:CellularComponent: count: 2021 provided_by: unknown: count: 2021 source: unknown: count: 2021 biolink:CellularComponent-biolink:subclass_of-biolink:CellularComponent: count: 4688 provided_by: unknown: count: 4688 source: unknown: count: 4688 biolink:ChemicalEntity-biolink:has_chemical_role-biolink:ChemicalRole: count: 1005 provided_by: unknown: count: 1005 source: unknown: count: 1005 biolink:ChemicalEntity-biolink:has_chemical_role-biolink:ChemicalSubstance: count: 1005 provided_by: unknown: count: 1005 source: unknown: count: 1005 biolink:ChemicalEntity-biolink:has_part-biolink:ChemicalEntity: count: 102275 provided_by: unknown: count: 102275 source: unknown: count: 102275 biolink:ChemicalEntity-biolink:has_part-biolink:ChemicalSubstance: count: 50334 provided_by: unknown: count: 50334 source: unknown: count: 50334 biolink:ChemicalEntity-biolink:related_to-biolink:ChemicalEntity: count: 111 provided_by: unknown: count: 111 source: unknown: count: 111 biolink:ChemicalEntity-biolink:related_to-biolink:ChemicalRole: count: 1005 provided_by: unknown: count: 1005 source: unknown: count: 1005 biolink:ChemicalEntity-biolink:related_to-biolink:ChemicalSubstance: count: 1509 provided_by: unknown: count: 1509 source: unknown: count: 1509 biolink:ChemicalEntity-biolink:subclass_of-biolink:ChemicalEntity: count: 51 provided_by: unknown: count: 51 source: unknown: count: 51 biolink:ChemicalEntity-biolink:subclass_of-biolink:ChemicalSubstance: count: 905 provided_by: unknown: count: 905 source: unknown: count: 905 biolink:ChemicalRole-biolink:subclass_of-biolink:ChemicalRole: count: 71 provided_by: unknown: count: 71 source: unknown: count: 71 biolink:ChemicalRole-biolink:subclass_of-biolink:ChemicalSubstance: count: 263 provided_by: unknown: count: 263 source: unknown: count: 263 biolink:ChemicalSubstance-biolink:has_chemical_role-biolink:ChemicalRole: count: 1040 provided_by: unknown: count: 1040 source: unknown: count: 1040 biolink:ChemicalSubstance-biolink:has_chemical_role-biolink:ChemicalSubstance: count: 1040 provided_by: unknown: count: 1040 source: unknown: count: 1040 biolink:ChemicalSubstance-biolink:location_of-biolink:OrganismTaxon: count: 59 provided_by: unknown: count: 59 source: unknown: count: 59 biolink:ChemicalSubstance-biolink:related_to-biolink:ChemicalEntity: count: 4025 provided_by: unknown: count: 4025 source: unknown: count: 4025 biolink:ChemicalSubstance-biolink:related_to-biolink:ChemicalRole: count: 31708 provided_by: unknown: count: 31708 source: unknown: count: 31708 biolink:ChemicalSubstance-biolink:related_to-biolink:ChemicalSubstance: count: 91511 provided_by: unknown: count: 91511 source: unknown: count: 91511 biolink:ChemicalSubstance-biolink:related_to-biolink:EnvironmentalFeature: count: 5 provided_by: unknown: count: 5 source: unknown: count: 5 biolink:ChemicalSubstance-biolink:related_to-biolink:NamedThing: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:ChemicalSubstance-biolink:subclass_of-biolink:ChemicalEntity: count: 503 provided_by: unknown: count: 503 source: unknown: count: 503 biolink:ChemicalSubstance-biolink:subclass_of-biolink:ChemicalRole: count: 281 provided_by: unknown: count: 281 source: unknown: count: 281 biolink:ChemicalSubstance-biolink:subclass_of-biolink:ChemicalSubstance: count: 274510 provided_by: unknown: count: 274510 source: unknown: count: 274510 biolink:ChemicalSubstance-biolink:subclass_of-biolink:EnvironmentalFeature: count: 76 provided_by: unknown: count: 76 source: unknown: count: 76 biolink:ChemicalSubstance-biolink:subclass_of-biolink:OntologyClass: count: 6 provided_by: unknown: count: 6 source: unknown: count: 6 biolink:EnvironmentalFeature-biolink:location_of-biolink:OrganismTaxon: count: 2898 provided_by: unknown: count: 2898 source: unknown: count: 2898 biolink:EnvironmentalFeature-biolink:related_to-biolink:AnatomicalEntity: count: 9 provided_by: unknown: count: 9 source: unknown: count: 9 biolink:EnvironmentalFeature-biolink:related_to-biolink:ChemicalEntity: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:EnvironmentalFeature-biolink:related_to-biolink:ChemicalSubstance: count: 4 provided_by: unknown: count: 4 source: unknown: count: 4 biolink:EnvironmentalFeature-biolink:related_to-biolink:EnvironmentalFeature: count: 6 provided_by: unknown: count: 6 source: unknown: count: 6 biolink:EnvironmentalFeature-biolink:related_to-biolink:OntologyClass: count: 27 provided_by: unknown: count: 27 source: unknown: count: 27 biolink:EnvironmentalFeature-biolink:related_to-biolink:OrganismTaxon: count: 3 provided_by: unknown: count: 3 source: unknown: count: 3 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:AnatomicalEntity: count: 5 provided_by: unknown: count: 5 source: unknown: count: 5 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:ChemicalSubstance: count: 2 provided_by: unknown: count: 2 source: unknown: count: 2 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:EnvironmentalFeature: count: 7 provided_by: unknown: count: 7 source: unknown: count: 7 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:NamedThing: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:OntologyClass: count: 60 provided_by: unknown: count: 60 source: unknown: count: 60 biolink:EnvironmentalFeature-biolink:subclass_of-biolink:OrganismTaxon: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:MolecularActivity-biolink:related_to-biolink:BiologicalProcess: count: 868 provided_by: unknown: count: 868 source: unknown: count: 868 biolink:MolecularActivity-biolink:related_to-biolink:CellularComponent: count: 48 provided_by: unknown: count: 48 source: unknown: count: 48 biolink:MolecularActivity-biolink:related_to-biolink:MolecularActivity: count: 252 provided_by: unknown: count: 252 source: unknown: count: 252 biolink:MolecularActivity-biolink:related_to-biolink:OntologyClass: count: 2 provided_by: unknown: count: 2 source: unknown: count: 2 biolink:MolecularActivity-biolink:subclass_of-biolink:MolecularActivity: count: 13718 provided_by: unknown: count: 13718 source: unknown: count: 13718 biolink:OntologyClass-None-biolink:OntologyClass: count: 259 provided_by: unknown: count: 259 source: unknown: count: 259 biolink:OntologyClass-biolink:location_of-biolink:OrganismTaxon: count: 2831 provided_by: unknown: count: 2831 source: unknown: count: 2831 biolink:OntologyClass-biolink:related_to-biolink:AnatomicalEntity: count: 36 provided_by: unknown: count: 36 source: unknown: count: 36 biolink:OntologyClass-biolink:related_to-biolink:BiologicalProcess: count: 10 provided_by: unknown: count: 10 source: unknown: count: 10 biolink:OntologyClass-biolink:related_to-biolink:ChemicalEntity: count: 38 provided_by: unknown: count: 38 source: unknown: count: 38 biolink:OntologyClass-biolink:related_to-biolink:ChemicalRole: count: 3 provided_by: unknown: count: 3 source: unknown: count: 3 biolink:OntologyClass-biolink:related_to-biolink:ChemicalSubstance: count: 182 provided_by: unknown: count: 182 source: unknown: count: 182 biolink:OntologyClass-biolink:related_to-biolink:EnvironmentalFeature: count: 166 provided_by: unknown: count: 166 source: unknown: count: 166 biolink:OntologyClass-biolink:related_to-biolink:OntologyClass: count: 1930 provided_by: unknown: count: 1930 source: unknown: count: 1930 biolink:OntologyClass-biolink:related_to-biolink:OrganismTaxon: count: 18 provided_by: unknown: count: 18 source: unknown: count: 18 biolink:OntologyClass-biolink:subclass_of-biolink:AnatomicalEntity: count: 3 provided_by: unknown: count: 3 source: unknown: count: 3 biolink:OntologyClass-biolink:subclass_of-biolink:BiologicalProcess: count: 73 provided_by: unknown: count: 73 source: unknown: count: 73 biolink:OntologyClass-biolink:subclass_of-biolink:ChemicalRole: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:OntologyClass-biolink:subclass_of-biolink:ChemicalSubstance: count: 11 provided_by: unknown: count: 11 source: unknown: count: 11 biolink:OntologyClass-biolink:subclass_of-biolink:EnvironmentalFeature: count: 235 provided_by: unknown: count: 235 source: unknown: count: 235 biolink:OntologyClass-biolink:subclass_of-biolink:NamedThing: count: 13 provided_by: unknown: count: 13 source: unknown: count: 13 biolink:OntologyClass-biolink:subclass_of-biolink:OntologyClass: count: 5435 provided_by: unknown: count: 5435 source: unknown: count: 5435 biolink:OntologyClass-biolink:subclass_of-biolink:OrganismTaxon: count: 1 provided_by: unknown: count: 1 source: unknown: count: 1 biolink:OntologyClass-biolink:type-biolink:OntologyClass: count: 45 provided_by: unknown: count: 45 source: unknown: count: 45 biolink:OrganismTaxon-biolink:capable_of-biolink:ActivityAndBehavior: count: 24353 provided_by: unknown: count: 24353 source: unknown: count: 24353 biolink:OrganismTaxon-biolink:capable_of-biolink:BiologicalProcess: count: 7601 provided_by: unknown: count: 7601 source: unknown: count: 7601 biolink:OrganismTaxon-biolink:capable_of-biolink:ChemicalEntity: count: 36623 provided_by: unknown: count: 36623 source: unknown: count: 36623 biolink:OrganismTaxon-biolink:capable_of-biolink:ChemicalSubstance: count: 36623 provided_by: unknown: count: 36623 source: unknown: count: 36623 biolink:OrganismTaxon-biolink:capable_of-biolink:OntologyClass: count: 258 provided_by: unknown: count: 258 source: unknown: count: 258 biolink:OrganismTaxon-biolink:has_phenotype-biolink:AbstractEntity: count: 19727 provided_by: unknown: count: 19727 source: unknown: count: 19727 biolink:OrganismTaxon-biolink:interacts_with-biolink:ChemicalEntity: count: 89 provided_by: unknown: count: 89 source: unknown: count: 89 biolink:OrganismTaxon-biolink:location_of-biolink:AnatomicalEntity: count: 1759 provided_by: unknown: count: 1759 source: unknown: count: 1759 biolink:OrganismTaxon-biolink:location_of-biolink:ChemicalSubstance: count: 851 provided_by: unknown: count: 851 source: unknown: count: 851 biolink:OrganismTaxon-biolink:location_of-biolink:EnvironmentalFeature: count: 17082 provided_by: unknown: count: 17082 source: unknown: count: 17082 biolink:OrganismTaxon-biolink:location_of-biolink:OntologyClass: count: 12809 provided_by: unknown: count: 12809 source: unknown: count: 12809 biolink:OrganismTaxon-biolink:location_of-biolink:OrganismTaxon: count: 624 provided_by: unknown: count: 624 source: unknown: count: 624 biolink:OrganismTaxon-biolink:location_of-unknown: count: 6775 provided_by: unknown: count: 6775 source: unknown: count: 6775 biolink:OrganismTaxon-biolink:occurs_in-biolink:ChemicalEntity: count: 8597 provided_by: unknown: count: 8597 source: unknown: count: 8597 biolink:OrganismTaxon-biolink:subclass_of-biolink:EnvironmentalFeature: count: 3 provided_by: unknown: count: 3 source: unknown: count: 3 biolink:OrganismTaxon-biolink:subclass_of-biolink:OntologyClass: count: 46 provided_by: unknown: count: 46 source: unknown: count: 46 biolink:OrganismTaxon-biolink:subclass_of-biolink:OrganismTaxon: count: 823500 provided_by: unknown: count: 823500 source: unknown: count: 823500 predicates: - biolink:capable_of - biolink:has_chemical_role - biolink:has_part - biolink:has_phenotype - biolink:interacts_with - biolink:location_of - biolink:occurs_in - biolink:related_to - biolink:subclass_of - biolink:type provided_by: - unknown source: - unknown total_edges: 1512115 graph_name: kg-microbe graph node_stats: count_by_category: biolink:AbstractEntity: count: 19 provided_by: nodes.tsv: count: 19 biolink:ActivityAndBehavior: count: 6 provided_by: nodes.tsv: count: 6 biolink:AnatomicalEntity: count: 596 provided_by: envo.json: count: 596 nodes.tsv: count: 4 biolink:BiologicalProcess: count: 30700 provided_by: envo.json: count: 42 go.json: count: 30616 nodes.tsv: count: 101 biolink:CellularComponent: count: 4496 provided_by: go.json: count: 4496 biolink:ChemicalEntity: count: 9680 provided_by: chebi.json: count: 507 envo.json: count: 25 nodes.tsv: count: 9680 biolink:ChemicalRole: count: 229 provided_by: chebi.json: count: 229 envo.json: count: 50 nodes.tsv: count: 229 biolink:ChemicalSubstance: count: 216145 provided_by: chebi.json: count: 216145 envo.json: count: 930 nodes.tsv: count: 738 biolink:EnvironmentalFeature: count: 60 provided_by: chebi.json: count: 2 envo.json: count: 57 ncbitaxon_removed_subset.json: count: 1 nodes.tsv: count: 60 biolink:MolecularActivity: count: 12546 provided_by: go.json: count: 12546 biolink:NamedThing: count: 4 provided_by: Graph: count: 4 biolink:OntologyClass: count: 9256 provided_by: chebi.json: count: 25 envo.json: count: 5541 go.json: count: 3797 ncbitaxon_removed_subset.json: count: 30 nodes.tsv: count: 53 biolink:OrganismTaxon: count: 824032 provided_by: envo.json: count: 204 ncbitaxon_removed_subset.json: count: 823386 nodes.tsv: count: 50371 unknown: count: 5 provided_by: nodes.tsv: count: 5 count_by_id_prefixes: BFO: 34 CARO: 3 CAS-RN: 190 CHEBI: 216899 ECOCORE: 6 ENVO: 4383 FAO: 1 FOODON: 421 GO: 51346 IAO: 28 KEGG: 1 NCBITaxon: 824033 OBI: 6 OBO: 40 OIO: 15 PATO: 408 PCO: 8 PO: 49 PubChem: 20 RO: 222 UBERON: 602 WD_Entity: 4 mediadive.ingredient: 259 mediadive.medium: 3297 mediadive.solution: 5388 traits.carbon_substrates: 3 traits.cell_shape_enum: 18 traits.data_source: 5 traits.pathways: 84 count_by_id_prefixes_by_category: biolink:AbstractEntity: traits.cell_shape_enum: 18 biolink:ActivityAndBehavior: ECOCORE: 6 biolink:AnatomicalEntity: UBERON: 596 biolink:BiologicalProcess: GO: 30616 traits.pathways: 84 biolink:CellularComponent: GO: 4496 biolink:ChemicalEntity: CAS-RN: 190 CHEBI: 522 KEGG: 1 PubChem: 20 mediadive.ingredient: 259 mediadive.medium: 3297 mediadive.solution: 5388 traits.carbon_substrates: 3 biolink:ChemicalRole: CHEBI: 229 biolink:ChemicalSubstance: CHEBI: 216145 biolink:EnvironmentalFeature: CHEBI: 2 ENVO: 43 FOODON: 1 NCBITaxon: 1 PATO: 6 PO: 1 UBERON: 6 biolink:MolecularActivity: GO: 12546 biolink:NamedThing: CARO: 3 CHEBI: 1 biolink:OntologyClass: BFO: 34 ENVO: 4340 FAO: 1 FOODON: 420 GO: 3688 IAO: 28 OBI: 6 OBO: 40 OIO: 15 PATO: 402 PCO: 8 PO: 48 RO: 222 WD_Entity: 4 biolink:OrganismTaxon: NCBITaxon: 824032 unknown: traits.data_source: 5 node_categories: - biolink:AbstractEntity - biolink:ActivityAndBehavior - biolink:AnatomicalEntity - biolink:BiologicalProcess - biolink:CellularComponent - biolink:ChemicalEntity - biolink:ChemicalRole - biolink:ChemicalSubstance - biolink:EnvironmentalFeature - biolink:MolecularActivity - biolink:NamedThing - biolink:OntologyClass - biolink:OrganismTaxon node_id_prefixes: - BFO - CARO - CAS-RN - CHEBI - ECOCORE - ENVO - FAO - FOODON - GO - IAO - KEGG - NCBITaxon - OBI - OBO - OIO - PATO - PCO - PO - PubChem - RO - UBERON - WD_Entity - mediadive.ingredient - mediadive.medium - mediadive.solution - traits.carbon_substrates - traits.cell_shape_enum - traits.data_source - traits.pathways node_id_prefixes_by_category: biolink:AbstractEntity: - traits.cell_shape_enum biolink:ActivityAndBehavior: - ECOCORE biolink:AnatomicalEntity: - UBERON biolink:BiologicalProcess: - GO - traits.pathways biolink:CellularComponent: - GO biolink:ChemicalEntity: - CHEBI - mediadive.medium - mediadive.solution - CAS-RN - mediadive.ingredient - PubChem - KEGG - traits.carbon_substrates biolink:ChemicalRole: - CHEBI biolink:ChemicalSubstance: - CHEBI biolink:EnvironmentalFeature: - NCBITaxon - CHEBI - ENVO - PATO - PO - UBERON - FOODON biolink:MolecularActivity: - GO biolink:NamedThing: - CHEBI - CARO biolink:OntologyClass: - IAO - OBO - OIO - BFO - RO - ENVO - WD_Entity - FAO - FOODON - GO - OBI - PATO - PCO - PO biolink:OrganismTaxon: - NCBITaxon unknown: - traits.data_source provided_by: - Graph - chebi.json - envo.json - go.json - ncbitaxon_removed_subset.json - nodes.tsv total_nodes: 1106939