name data_type unit description Ab Count Integer None Antibody count from antibodypedia.com Antibodypedia.com URL String None Antibodypedia.com detail page URL for a given protein. ChEMBL Activity Count Integer None Number of filtered bioactivities in ChEMBL better than 1uM (10uM for Ion Channels) ChEMBL First Reference Year Integer None The year of the oldest bioactivity reference this target has in ChEMBL. Note that this is derived from ChEMBL activities as filtered for TCRD purposes. ChEMBL Selective Compound String None 2 log selective compound on this target. Value is ChEMBL ID and SMILES joined with a pipe character. Drugable Epigenome Class String None Drugable Epigenome Class/Domain from Nature Reviews Drug Discovery 11, 384-400 (May 2012) DrugDB Count Integer None Number of drugs in DrugDB with with activity better than 1uM (10uM for Ion Channels) EBI Total Patent Count Integer None Total count of all patents mentioning this protein according to EBI text mining EBI Total Patent Count (Relevant) Integer None Total count of all relevant patents mentioning this protein according to EBI text mining Experimental MF/BP Leaf Term GOA String None Indicates that a target is annotated with one or more GO MF/BP leaf term with Experimental Evidence code. Value is a concatenation of all GO terms/names/evidences. GTEx Tissue Specificity Index Number None Tau as defined in Yanai, I. et. al., Bioinformatics 21(5): 650-659 (2005) calculated on GTEx data. Has MLP Assay Boolean None Indicates that a protein is used in at least one PubChem MLP assay. Details are in mlp_assay_info tabel. HPA Tissue Specificity Index Number None Tau as defined in Yanai, I. et. al., Bioinformatics 21(5): 650-659 (2005) calculated on HPA Protein data. HPM Gene Tissue Specificity Index Number None Tau as defined in Yanai, I. et. al., Bioinformatics 21(5): 650-659 (2005) calculated on HPM Gene data. HPM Protein Tissue Specificity Index Number None Tau as defined in Yanai, I. et. al., Bioinformatics 21(5): 650-659 (2005) calculated on HPM Protein data. IMPC Clones String None #Clones from IMPC Spreadsheet IMPC Status String None Best Status from IMPC Spreadsheet Is Transcription Factor Boolean None Target is a transcription factor according to http://www.bioguo.org/AnimalTFDB JensenLab COMPARTMENT Prediction Plasma membrane String None Prediction method and value (conf 2 or 3 only) that the protein is Plasma membrane from JensenLab COMPARTMENTS resouce JensenLab PubMed Score Number None PubMed paper count from textmining done in group of Lars-Juhl Jensen. MAb Count Integer None Monoclonal Antibody count from antibodypedia.com NCBI Gene PubMed Count Integer None Number of PubMed references for target and all its aliases NCBI Gene Summary String None Gene summary statement from NCBI Gene database PubTator Score Number None PubMed paper count from PubTator data run through Lars Jensen's counting proceedure TIN-X Novelty Score Number None TIN-X novelty score from Cristian Bologa. TM Count Integer None Number of transmembrane helices according to Survey of the Human Transmembrane Proteome (https://modbase.compbio.ucsf.edu/projects/membrane/). At least 2 are required to be in their list. TMHMM Prediction String None Short output from TMHMM run locally on protein sequences. UniProt Function String None Funtion comment from UniProt